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Comparative profiling of human fetal and adult erythropoiesis - GSE36994 (SuperSeries)

In Progress
Clinical

This SuperSeries is composed of the following SubSeries:

GSE36984 Expression Profiling of Primary Human Fetal and Adult Hematopoietic Stem/Progenitor Cells (HSPCs) and Differentiating Proerythroblasts (ProEs)

GSE36988 Expression Profiling of Primary Human Proerythroblasts (ProEs) After IRF2, IRF6, and MYB shRNA
Purpose

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Hypothesis

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Experimental Design

Refer to individual Series

Experimental Variables

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Controls

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Methods

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Additional Information

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Microarray
Affymetrix Affymetrix-U133 v2
42 Samples Loaded: 42
Human (Homo sapiens)
Erythroid cells , Adult , Fetal
Sample Set Spreadsheet
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Samples Preview
Sample ID !Sample Title tissue Developmental stage transfection Group name
GSM908012 Fetal-day0-A primary HSPCs isolated from 2-trimester fetal liver 2-trimester fetal liver fetal HSPCs
GSM908013 Fetal-day0-B primary HSPCs isolated from 2-trimester fetal liver 2-trimester fetal liver fetal HSPCs
GSM908014 Fetal-day0-C primary HSPCs isolated from 2-trimester fetal liver 2-trimester fetal liver fetal HSPCs
GSM908015 Fetal-day3-A ex vivo differentiating ProEs 2-trimester fetal liver fetal ProEs day 3
GSM908016 Fetal-day3-B ex vivo differentiating ProEs 2-trimester fetal liver fetal ProEs day 3

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Browse Files

File
GSE36994_modified.csv
Sample Set Spreadsheet
GSE36994_modified.csv
Sample Set Spreadsheet
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Clinical Datasource
Links
http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE36994
http://www.ncbi.nlm.nih.gov/pubmed/23041383

Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID !Sample Title Tissue Developmental stage Transfection Group name
GSM908012
Fetal-day0-A
primary HSPCs isolated from 2-trimester fetal liver
2-trimester fetal liver
 
fetal HSPCs
GSM908013
Fetal-day0-B
primary HSPCs isolated from 2-trimester fetal liver
2-trimester fetal liver
 
fetal HSPCs
GSM908014
Fetal-day0-C
primary HSPCs isolated from 2-trimester fetal liver
2-trimester fetal liver
 
fetal HSPCs
GSM908015
Fetal-day3-A
ex vivo differentiating ProEs
2-trimester fetal liver
 
fetal ProEs day 3
GSM908016
Fetal-day3-B
ex vivo differentiating ProEs
2-trimester fetal liver
 
fetal ProEs day 3
GSM908017
Fetal-day5-A
ex vivo differentiating ProEs
2-trimester fetal liver
 
fetal ProEs day 5
GSM908018
Fetal-day5-B
ex vivo differentiating ProEs
2-trimester fetal liver
 
fetal ProEs day 5
GSM908019
Fetal-day5-C
ex vivo differentiating ProEs
2-trimester fetal liver
 
fetal ProEs day 5
GSM908020
Fetal-day7-A
ex vivo differentiating ProEs
2-trimester fetal liver
 
fetal ProEs day 7
GSM908021
Fetal-day7-B
ex vivo differentiating ProEs
2-trimester fetal liver
 
fetal ProEs day 7
GSM908022
Adult-day0-A
primary HSPCs isolated from G-CSF mobilized peripheral blood mononuclear cells from healthy donors
adult bone marrow
 
adult HSPCs
GSM908023
Adult-day0-B
primary HSPCs isolated from G-CSF mobilized peripheral blood mononuclear cells from healthy donors
adult bone marrow
 
adult HSPCs
GSM908024
Adult-day0-C
primary HSPCs isolated from G-CSF mobilized peripheral blood mononuclear cells from healthy donors
adult bone marrow
 
adult HSPCs
GSM908025
Adult-day3-A
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 3
GSM908026
Adult-day3-B
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 3
GSM908027
Adult-day3-C
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 3
GSM908028
Adult-day5-A
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 5
GSM908029
Adult-day5-B
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 5
GSM908030
Adult-day5-C
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 5
GSM908031
Adult-day7-A
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 7
GSM908032
Adult-day7-B
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 7
GSM908033
Adult-day7-C
ex vivo differentiating ProEs
adult bone marrow
 
adult ProEs day 7
GSM908090
Fetal day5-A
ex vivo differentiating ProEs
2-trimester fetal liver
none
fetal ProEs
GSM908091
Fetal day5-B
ex vivo differentiating ProEs
2-trimester fetal liver
none
fetal ProEs
GSM908092
Fetal day5-C
ex vivo differentiating ProEs
2-trimester fetal liver
none
fetal ProEs
GSM908093
Adult day5-A
ex vivo differentiating ProEs
adult bone marrow
none
adult ProEs
GSM908094
Adult day5-B
ex vivo differentiating ProEs
adult bone marrow
none
adult ProEs
GSM908095
Adult day5-C
ex vivo differentiating ProEs
adult bone marrow
none
adult ProEs
GSM908096
IRF2 shRNA-A
ex vivo differentiating ProEs
adult bone marrow
shRNAs against IRF2
adult ProEs IRF2-KO
GSM908097
IRF2 shRNA-B
ex vivo differentiating ProEs
adult bone marrow
shRNAs against IRF2
adult ProEs IRF2-KO
GSM908098
IRF2 shRNA-C
ex vivo differentiating ProEs
adult bone marrow
shRNAs against IRF2
adult ProEs IRF2-KO
GSM908099
IRF6 shRNA-A
ex vivo differentiating ProEs
adult bone marrow
shRNAs against IRF6
adult ProEs IRF6-KO
GSM908100
IRF6 shRNA-B
ex vivo differentiating ProEs
adult bone marrow
shRNAs against IRF6
adult ProEs IRF6-KO
GSM908101
IRF6 shRNA-C
ex vivo differentiating ProEs
adult bone marrow
shRNAs against IRF6
adult ProEs IRF6-KO
GSM908102
Control shRNA-A
ex vivo differentiating ProEs
adult bone marrow
control shRNAs
adult ProEs transfection ctl.
GSM908103
Control shRNA-B
ex vivo differentiating ProEs
adult bone marrow
control shRNAs
adult ProEs transfection ctl.
GSM908104
Control shRNA-C
ex vivo differentiating ProEs
adult bone marrow
control shRNAs
adult ProEs transfection ctl.
GSM908105
Control shRNA-D
ex vivo differentiating ProEs
adult bone marrow
control shRNAs
adult ProEs transfection ctl.
GSM908106
MYB shRNA-A
ex vivo differentiating ProEs
adult bone marrow
shRNAs against MYB
 
GSM908107
MYB shRNA-B
ex vivo differentiating ProEs
adult bone marrow
shRNAs against MYB
 
GSM908108
MYB shRNA-C
ex vivo differentiating ProEs
adult bone marrow
shRNAs against MYB
 
GSM908109
MYB shRNA-D
ex vivo differentiating ProEs
adult bone marrow
shRNAs against MYB
 

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