SIDRA
Sample Set Annotation Tool
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All Samples
New Group
Split Group Set
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View in Gene Expression Browser
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Groups
no BPD
400005049: GSM804017
400005050: GSM804018
400005051: GSM804019
400005052: GSM804020
400005053: GSM804021
400005055: GSM804023
400005058: GSM804026
400005065: GSM804033
400005070: GSM804038
400005071: GSM804039
400005074: GSM804042
400005075: GSM804043
400005076: GSM804044
400005084: GSM804052
400005085: GSM804053
400005090: GSM804058
400005091: GSM804059
400005092: GSM804060
400005095: GSM804063
400005096: GSM804064
400005097: GSM804065
400005098: GSM804066
400005102: GSM804070
400005105: GSM804073
400005107: GSM804075
400005110: GSM804078
400005113: GSM804081
400005115: GSM804083
400005117: GSM804085
400005128: GSM804096
400005135: GSM804103
400005141: GSM804109
400005142: GSM804110
400005144: GSM804112
400005147: GSM804115
400005148: GSM804116
400005149: GSM804117
400005150: GSM804118
400005151: GSM804119
400005152: GSM804120
400005154: GSM804122
400005156: GSM804124
400005166: GSM804134
400005167: GSM804135
400005170: GSM804138
400005171: GSM804139
400005172: GSM804140
400005179: GSM804147
400005180: GSM804148
400005185: GSM804153
400005186: GSM804154
400005187: GSM804155
400005190: GSM804158
400005191: GSM804159
400005192: GSM804160
400005193: GSM804161
400005194: GSM804162
400005198: GSM804166
400005201: GSM804169
400005203: GSM804171
400005204: GSM804172
400005206: GSM804174
400005207: GSM804175
400005208: GSM804176
400005211: GSM804179
400005213: GSM804181
400005216: GSM804184
400005220: GSM804188
400005227: GSM804195
400005233: GSM804201
400005240: GSM804208
400005242: GSM804210
400005244: GSM804212
400005245: GSM804213
400005246: GSM804214
400005247: GSM804215
400005248: GSM804216
400005249: GSM804217
400005250: GSM804218
400005252: GSM804220
400005255: GSM804223
400005262: GSM804230
400005267: GSM804235
400005268: GSM804236
400005271: GSM804239
400005272: GSM804240
400005273: GSM804241
400005282: GSM804250
400005283: GSM804251
400005288: GSM804256
400005289: GSM804257
400005290: GSM804258
400005292: GSM804260
400005293: GSM804261
400005294: GSM804262
400005295: GSM804263
400005296: GSM804264
400005300: GSM804268
400005304: GSM804272
400005305: GSM804273
400005306: GSM804274
400005309: GSM804277
400005310: GSM804278
400005312: GSM804280
400005314: GSM804282
400005317: GSM804285
400005322: GSM804290
400005336: GSM804304
400005342: GSM804310
400005344: GSM804312
400005346: GSM804314
400005347: GSM804315
0
samples selected
Move selected samples to group
mild BPD
moderate BPD
severe BPD
unknown phenotype
Move
Create sample set from this group
mild BPD
400005054: GSM804022
400005056: GSM804024
400005057: GSM804025
400005062: GSM804030
400005066: GSM804034
400005068: GSM804036
400005069: GSM804037
400005073: GSM804041
400005077: GSM804045
400005078: GSM804046
400005079: GSM804047
400005080: GSM804048
400005082: GSM804050
400005083: GSM804051
400005086: GSM804054
400005087: GSM804055
400005089: GSM804057
400005099: GSM804067
400005100: GSM804068
400005101: GSM804069
400005104: GSM804072
400005108: GSM804076
400005109: GSM804077
400005114: GSM804082
400005116: GSM804084
400005119: GSM804087
400005121: GSM804089
400005122: GSM804090
400005127: GSM804095
400005129: GSM804097
400005134: GSM804102
400005138: GSM804106
400005139: GSM804107
400005146: GSM804114
400005153: GSM804121
400005155: GSM804123
400005160: GSM804128
400005163: GSM804131
400005165: GSM804133
400005169: GSM804137
400005173: GSM804141
400005174: GSM804142
400005175: GSM804143
400005176: GSM804144
400005177: GSM804145
400005178: GSM804146
400005181: GSM804149
400005182: GSM804150
400005184: GSM804152
400005195: GSM804163
400005196: GSM804164
400005197: GSM804165
400005199: GSM804167
400005200: GSM804168
400005205: GSM804173
400005212: GSM804180
400005214: GSM804182
400005215: GSM804183
400005218: GSM804186
400005219: GSM804187
400005221: GSM804189
400005226: GSM804194
400005228: GSM804196
400005229: GSM804197
400005232: GSM804200
400005236: GSM804204
400005237: GSM804205
400005238: GSM804206
400005251: GSM804219
400005253: GSM804221
400005254: GSM804222
400005259: GSM804227
400005263: GSM804231
400005265: GSM804233
400005266: GSM804234
400005270: GSM804238
400005274: GSM804242
400005275: GSM804243
400005276: GSM804244
400005277: GSM804245
400005280: GSM804248
400005281: GSM804249
400005284: GSM804252
400005285: GSM804253
400005287: GSM804255
400005297: GSM804265
400005298: GSM804266
400005299: GSM804267
400005302: GSM804270
400005303: GSM804271
400005307: GSM804275
400005308: GSM804276
400005313: GSM804281
400005315: GSM804283
400005316: GSM804284
400005320: GSM804288
400005321: GSM804289
400005323: GSM804291
400005328: GSM804296
400005329: GSM804297
400005330: GSM804298
400005335: GSM804303
400005338: GSM804306
400005339: GSM804307
400005340: GSM804308
400005345: GSM804313
0
samples selected
Move selected samples to group
no BPD
moderate BPD
severe BPD
unknown phenotype
Move
Create sample set from this group
moderate BPD
400005088: GSM804056
400005093: GSM804061
400005094: GSM804062
400005103: GSM804071
400005112: GSM804080
400005118: GSM804086
400005123: GSM804091
400005124: GSM804092
400005125: GSM804093
400005133: GSM804101
400005136: GSM804104
400005140: GSM804108
400005143: GSM804111
400005183: GSM804151
400005188: GSM804156
400005189: GSM804157
400005210: GSM804178
400005217: GSM804185
400005222: GSM804190
400005223: GSM804191
400005224: GSM804192
400005234: GSM804202
400005239: GSM804207
400005241: GSM804209
400005286: GSM804254
400005291: GSM804259
400005301: GSM804269
400005318: GSM804286
400005324: GSM804292
400005325: GSM804293
400005326: GSM804294
400005334: GSM804302
400005337: GSM804305
400005341: GSM804309
0
samples selected
Move selected samples to group
no BPD
mild BPD
severe BPD
unknown phenotype
Move
Create sample set from this group
severe BPD
400005059: GSM804027
400005060: GSM804028
400005061: GSM804029
400005064: GSM804032
400005067: GSM804035
400005072: GSM804040
400005106: GSM804074
400005111: GSM804079
400005120: GSM804088
400005126: GSM804094
400005130: GSM804098
400005131: GSM804099
400005132: GSM804100
400005137: GSM804105
400005145: GSM804113
400005157: GSM804125
400005158: GSM804126
400005159: GSM804127
400005162: GSM804130
400005164: GSM804132
400005168: GSM804136
400005202: GSM804170
400005209: GSM804177
400005225: GSM804193
400005230: GSM804198
400005231: GSM804199
400005235: GSM804203
400005243: GSM804211
400005256: GSM804224
400005257: GSM804225
400005258: GSM804226
400005261: GSM804229
400005264: GSM804232
400005269: GSM804237
400005279: GSM804247
400005311: GSM804279
400005319: GSM804287
400005327: GSM804295
400005331: GSM804299
400005332: GSM804300
400005333: GSM804301
400005343: GSM804311
0
samples selected
Move selected samples to group
no BPD
mild BPD
moderate BPD
unknown phenotype
Move
Create sample set from this group
unknown phenotype
400005063: GSM804031
400005081: GSM804049
400005161: GSM804129
400005260: GSM804228
400005278: GSM804246
0
samples selected
Move selected samples to group
no BPD
mild BPD
moderate BPD
severe BPD
Move
Create sample set from this group
Are you sure?
Are you sure you want to delete this group?
New Group
Name
Split Group Set
Split Using
Birth weight (grams)
Bronchopulmonary dysplasia (bpd) group
Days of life
Gender
Gestational age (weeks)
Group name
Oxygen 28 days
Oxygen 36 weeks postmenstrual age (wpma)
Periventricular leukomalacia (pvl)
Retinopathy of prematurity (rop) group
Rop lasertherapy
Sample Title
Tissue
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
Copy all files
Group Settings
Group
no BPD
mild BPD
moderate BPD
severe BPD
unknown phenotype
Name
Display Order
Move
Move this group to
before
after
no BPD
mild BPD
moderate BPD
severe BPD
unknown phenotype
Move
Color
Create Groups
Split by
Birth weight (grams)
Bronchopulmonary dysplasia (bpd) group
Days of life
Gender
Gestational age (weeks)
Group name
Oxygen 28 days
Oxygen 36 weeks postmenstrual age (wpma)
Periventricular leukomalacia (pvl)
Retinopathy of prematurity (rop) group
Rop lasertherapy
Sample Title
Tissue
(split into
63
groups)
Ex:
1130, 1140, 1370, 1100, 550
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release